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PF3D7_1344600 lipoyl synthase [ Plasmodium falciparum 3D7 ]

Gene ID: 813778, updated on 16-Oct-2023

Summary

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Gene symbol
PF3D7_1344600
Gene description
lipoyl synthase
Locus tag
PF3D7_1344600
Gene type
protein coding
RNA name
lipoyl synthase
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_004331.3 (1789425..1790672)

Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene U6 snRNA phosphodiesterase, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene aspartate carbamoyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004331.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Roles of Ferredoxin-Dependent Proteins in the Apicoplast of Plasmodium falciparum Parasites. Swift RP, et al. mBio, 2021 Feb 22. PMID 35164549, Free PMC Article
  2. The human malaria parasite Plasmodium falciparum has distinct organelle-specific lipoylation pathways. Wrenger C, et al. Mol Microbiol, 2004 Jul. PMID 15225307
  3. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
  4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867
  5. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables lipoate synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within lipoate biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in apicoplast HDA PubMed 
located_in apicoplast IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
lipoyl synthase
XP_001350160.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004331.3 Reference assembly

    Range
    1789425..1790672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350124.1 → XP_001350160.1  lipoyl synthase [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350160.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q8IDQ0
    UniProtKB/TrEMBL
    A0A024V1G5, A0A024VEY3, A0A024X2U9, A0A0L1IGU8, A0A0L7KCM9, A0A0L7M871, W4IBR1, W7F2R8, W7KAL9
    Conserved Domains (1) summary
    PTZ00413
    Location:3 → 415
    PTZ00413; lipoate synthase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8IDQ0.1

Gene LinkOut

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Molecular Biology Databases
Research Materials