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PF3D7_1344800 aspartate carbamoyltransferase [ Plasmodium falciparum 3D7 ]

Gene ID: 813779, updated on 17-May-2024

Summary

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Gene symbol
PF3D7_1344800
Gene description
aspartate carbamoyltransferase
Primary source
PlasmoDB:PF3D7_1344800
Locus tag
PF3D7_1344800
Gene type
protein coding
RNA name
aspartate carbamoyltransferase
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 13
Exon count:
3
Sequence:
Chromosome: 13; NC_004331.3 (1796274..1797709)

Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene lipoyl synthase Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004331.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular Target Validation of Aspartate Transcarbamoylase from Plasmodium falciparum by Torin 2. Bosch SS, et al. ACS Infect Dis, 2020 May 8. PMID 32129597
  2. Identification of a non-competitive inhibitor of Plasmodium falciparum aspartate transcarbamoylase. Lunev S, et al. Biochem Biophys Res Commun, 2018 Mar 11. PMID 29476738
  3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Process Evidence Code Pubs
acts_upstream_of_or_within response to xenobiotic stimulus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
aspartate carbamoyltransferase
XP_001350162.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004331.3 Reference assembly

    Range
    1796274..1797709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350126.1 → XP_001350162.1  aspartate carbamoyltransferase [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350162.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V0Z9, A0A024VYC0, A0A024WL46, A0A024X349, A0A5K1K910, O15804, W4IB17, W4J0L2, W7EVT9, W7FCC0, W7J6E0, W7K057
    Conserved Domains (1) summary
    COG0540
    Location:55 → 370
    PyrB; Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism]
Nucleotide Protein
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