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PF3D7_1345700 isocitrate dehydrogenase [NADP], mitochondrial [ Plasmodium falciparum 3D7 ]

Gene ID: 814208, updated on 16-Oct-2023

Summary

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Gene symbol
PF3D7_1345700
Gene description
isocitrate dehydrogenase [NADP], mitochondrial
Locus tag
PF3D7_1345700
Gene type
protein coding
RNA name
isocitrate dehydrogenase [NADP], mitochondrial
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_004331.3 (1828283..1829689, complement)

Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 Neighboring gene inner membrane complex protein Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene kinetochore protein SPC25, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004331.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic investigation of tricarboxylic acid metabolism during the Plasmodium falciparum life cycle. Ke H, et al. Cell Rep, 2015 Apr 7. PMID 25843709, Free PMC Article
  2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
  3. A Prioritized and Validated Resource of Mitochondrial Proteins in Plasmodium Identifies Unique Biology. van Esveld SL, et al. mSphere, 2021 Oct 27. PMID 34494883, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Process Evidence Code Pubs
acts_upstream_of_or_within tricarboxylic acid cycle IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IDA
Inferred from Direct Assay
more info
  
located_in mitochondrion RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP], mitochondrial
XP_001350171.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004331.3 Reference assembly

    Range
    1828283..1829689 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350135.1 → XP_001350171.1  isocitrate dehydrogenase [NADP], mitochondrial [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350171.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V2A8, A0A024VKL9, A0A024W1U1, A0A024WL57, A0A024X1X1, A0A0L1ID30, A0A0L7KC34, A0A0L7M2N8, Q8I6T2, W4IA64, W4J1V9, W7FCC9, W7FG98, W7JI81, W7KAN0
    Conserved Domains (1) summary
    PTZ00435
    Location:28 → 440
    PTZ00435; isocitrate dehydrogenase; Provisional
Nucleotide Protein
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