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allC allantoate amidohydrolase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945150, updated on 11-Apr-2024

Summary

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Gene symbol
allC
Gene description
allantoate amidohydrolase
Primary source
ASAP:ABE-0001777
Locus tag
b0516
See related
ECOCYC:G6285
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0509; glxB7; ylbB
Summary
Escherichia coli is able to utilize allantoin as a sole nitrogen source under anaerobic conditions . [More information is available at EcoCyc: G6285].
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Genomic context

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Sequence:
NC_000913.3 (544057..545292, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene glycerate 2-kinase 2 Neighboring gene (S)-ureidoglycine aminohydrolase Neighboring gene ureidoglycolate dehydrogenase Neighboring gene putative oxamate carbamoyltransferase FdrA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural analysis of a ternary complex of allantoate amidohydrolase from Escherichia coli reveals its mechanics. Agarwal R, et al. J Mol Biol, 2007 Apr 27. PMID 17362992
  2. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
  3. Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli. Cusa E, et al. J Bacteriol, 1999 Dec. PMID 10601204, Free PMC Article
  4. Chemical basis of nitrogen recovery through the ureide pathway: formation and hydrolysis of S-ureidoglycine in plants and bacteria. Serventi F, et al. ACS Chem Biol, 2010 Feb 19. PMID 20038185
  5. Ureide catabolism in Arabidopsis thaliana and Escherichia coli. Werner AK, et al. Nat Chem Biol, 2010 Jan. PMID 19935661

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables allantoate deiminase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables allantoate deiminase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEA
Inferred from Electronic Annotation
more info
  
enables manganese ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within allantoin assimilation pathway IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in allantoin assimilation pathway IEA
Inferred from Electronic Annotation
more info
  
involved_in allantoin catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in purine nucleobase metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
allantoate amidohydrolase
NP_415049.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    544057..545292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415049.1 allantoate amidohydrolase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415049.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6M9WYA6
    Conserved Domains (1) summary
    TIGR03176
    Location:1 → 411
    AllC; allantoate amidohydrolase
Nucleotide Protein
Heading Accession and Version

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