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sufB Fe-S cluster scaffold complex subunit SufB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945753, updated on 4-Apr-2024

Summary

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Gene symbol
sufB
Gene description
Fe-S cluster scaffold complex subunit SufB
Primary source
ASAP:ABE-0005621
Locus tag
b1683
See related
ECOCYC:G6909
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1679; ynhE
Summary
SufBCD increases SufSE cysteine desulfurase activity and involved in iron acquisition. [More information is available at EcoGene: EG13965]. The SufB-SufC-SufD complex activates the cysteine desulfurase activity SufS in conjunction with the SufE sulfur acceptor protein . [More information is available at EcoCyc: G6909].
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Genomic context

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Sequence:
NC_000913.3 (1762522..1764009, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene L-cysteine desulfurase Neighboring gene Fe-S cluster scaffold complex subunit SufD Neighboring gene Fe-S cluster scaffold complex subunit SufC Neighboring gene iron-sulfur cluster insertion protein SufA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular investigation of iron-sulfur cluster assembly scaffolds under stress. Blanc B, et al. Biochemistry, 2014 Dec 23. PMID 25485887
  2. SufC hydrolyzes ATP and interacts with SufB from Thermotoga maritima. Rangachari K, et al. FEBS Lett, 2002 Mar 13. PMID 11943156
  3. Iron-sulfur (Fe-S) cluster assembly: the SufBCD complex is a new type of Fe-S scaffold with a flavin redox cofactor. Wollers S, et al. J Biol Chem, 2010 Jul 23. PMID 20460376, Free PMC Article
  4. Molecular dynamism of Fe-S cluster biosynthesis implicated by the structure of the SufC(2)-SufD(2) complex. Wada K, et al. J Mol Biol, 2009 Mar 20. PMID 19361433, Free PMC Article
  5. AtNAP1 represents an atypical SufB protein in Arabidopsis plastids. Xu XM, et al. J Biol Chem, 2005 Feb 25. PMID 15611066, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables 4 iron, 4 sulfur cluster binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within iron-sulfur cluster assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in iron-sulfur cluster assembly NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of iron-sulfur cluster assembly complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of iron-sulfur cluster assembly complex IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
Fe-S cluster scaffold complex subunit SufB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1762522..1764009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416198.2 Fe-S cluster scaffold complex subunit SufB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416198.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A828ABU4
    Conserved Domains (1) summary
    PRK11814
    Location:1 → 495
    PRK11814; cysteine desulfurase activator complex subunit SufB; Provisional
Nucleotide Protein
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