U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

yeiR zinc-binding GTPase YeiR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946701, updated on 4-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
yeiR
Gene description
zinc-binding GTPase YeiR
Primary source
ASAP:ABE-0007194
Locus tag
b2173
See related
ECOCYC:EG12104
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2167
Summary
CobW homolog. [More information is available at EcoGene: EG12104].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (2267829..2268815)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene elongation factor P-like protein YeiP Neighboring gene putative oxidoreductase YeiQ Neighboring gene lipid A-core phosphotransferase Neighboring gene peptidoglycan endopeptidase/peptidoglycan L,D-carboxypeptidase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Segmentally variable genes: a new perspective on adaptation. Zheng Y, et al. PLoS Biol, 2004 Apr. PMID 15094797, Free PMC Article
  2. A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life. Haas CE, et al. BMC Genomics, 2009 Oct 12. PMID 19822009, Free PMC Article
  3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
  4. YeiR: a metal-binding GTPase from Escherichia coli involved in metal homeostasis. Blaby-Haas CE, et al. Metallomics, 2012 May. PMID 22511334, Free PMC Article
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
zinc-binding GTPase YeiR

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2267829..2268815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416678.1 zinc-binding GTPase YeiR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416678.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A895NJW2
    Conserved Domains (1) summary
    COG0523
    Location:2 → 328
    YejR; GTPase, G3E family [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.