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gutQ D-arabinose 5-phosphate isomerase GutQ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947587, updated on 2-May-2024

Summary

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Gene symbol
gutQ
Gene description
D-arabinose 5-phosphate isomerase GutQ
Primary source
ASAP:ABE-0008902
Locus tag
b2708
See related
ECOCYC:EG10973
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2703; srlQ
Summary
GutQ is homologous to KpsF and KdsD. [More information is available at EcoGene: EG10973]. gutQ encodes the second of two D-arabinose 5-phosphate isomerases (API) in Escherichia coli. [More information is available at EcoCyc: EG10973].
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Genomic context

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Sequence:
NC_000913.3 (2829813..2830778)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene sorbitol-6-phosphate 2-dehydrogenase Neighboring gene DNA-binding transcriptional activator GutM Neighboring gene DNA-binding transcriptional repressor SrlR Neighboring gene DNA-binding transcriptional dual regulator NorR Neighboring gene anaerobic nitric oxide reductase flavorubredoxin Neighboring gene NADH:flavorubredoxin reductase Neighboring gene carbamoyl--[HypE] ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reduced polysialic acid capsule expression in Escherichia coli K1 mutants with chromosomal defects in kpsF. Cieslewicz M, et al. Mol Microbiol, 1997 Oct. PMID 9383150
  2. Cloning, sequencing, expression, and complementation analysis of the Escherichia coli K1 kps region 1 gene, kpsE, and identification of an upstream open reading frame encoding a protein with homology to GutQ. Cieslewicz MJ, et al. J Bacteriol, 1993 Dec. PMID 8253690, Free PMC Article
  3. Nucleotide sequence and expression of the gutQ gene within the glucitol operon of Escherichia coli. Yamada M, et al. DNA Seq, 1990. PMID 2134185
  4. Identification of GutQ from Escherichia coli as a D-arabinose 5-phosphate isomerase. Meredith TC, et al. J Bacteriol, 2005 Oct. PMID 16199563, Free PMC Article
  5. Redefining the requisite lipopolysaccharide structure in Escherichia coli. Meredith TC, et al. ACS Chem Biol, 2006 Feb 17. PMID 17163638

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables arabinose-5-phosphate isomerase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables arabinose-5-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables carbohydrate derivative binding IEA
Inferred from Electronic Annotation
more info
  
enables identical protein binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbohydrate derivative metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within keto-3-deoxy-D-manno-octulosonic acid biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in keto-3-deoxy-D-manno-octulosonic acid biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in lipopolysaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein homotetramerization IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within single-species biofilm formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
D-arabinose 5-phosphate isomerase GutQ
NP_417188.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2829813..2830778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417188.4 D-arabinose 5-phosphate isomerase GutQ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417188.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7L5V7R0, A0A8S7FWQ8
    Conserved Domains (1) summary
    PRK11543
    Location:1 → 321
    gutQ; arabinose-5-phosphate isomerase GutQ
Nucleotide Protein
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