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yhiJ DUF4049 domain-containing protein YhiJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948001, updated on 6-Oct-2023

Summary

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Gene symbol
yhiJ
Gene description
DUF4049 domain-containing protein YhiJ
Primary source
ASAP:ABE-0011387
Locus tag
b3488
See related
ECOCYC:EG12225
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3473
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Genomic context

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Sequence:
NC_000913.3 (3630968..3632590, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribosome-associated ATPase Neighboring gene putative membrane fusion protein YhiI Neighboring gene protein YhiY Neighboring gene pseudo Neighboring gene inner membrane protein YhiM

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gap-filling analysis of the iJO1366 Escherichia coli metabolic network reconstruction for discovery of metabolic functions. Orth JD, et al. BMC Syst Biol, 2012 May 1. PMID 22548736, Free PMC Article
  2. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
  3. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Lu P, et al. Nat Biotechnol, 2007 Jan. PMID 17187058
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within inositol catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
DUF4049 domain-containing protein YhiJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3630968..3632590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417945.1 DUF4049 domain-containing protein YhiJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417945.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376MK88, A0A827XTN1
    Conserved Domains (1) summary
    pfam13258
    Location:194 → 503
    DUF4049; Domain of unknown function (DUF4049)
Nucleotide Protein
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