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treF cytoplasmic trehalase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948037, updated on 2-May-2024

Summary

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Gene symbol
treF
Gene description
cytoplasmic trehalase
Primary source
ASAP:ABE-0011497
Locus tag
b3519
See related
ECOCYC:EG12245
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3504
Summary
The subunit structure of the cytoplasmic trehalase has not been determined. [More information is available at EcoCyc: EG12245].
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Genomic context

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Sequence:
NC_000913.3 (3669592..3671241)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene glutamate decarboxylase A Neighboring gene cytochrome c peroxidase Neighboring gene putative DNA-binding transcriptional regulator YhjB Neighboring gene putative DNA-binding transcriptional regulator YhjC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Determinants of translocation and folding of TreF, a trehalase of Escherichia coli. Uhland K, et al. J Biol Chem, 2000 Aug 4. PMID 10816581
  2. Characterization of a cytoplasmic trehalase of Escherichia coli. Horlacher R, et al. J Bacteriol, 1996 Nov. PMID 8892826, Free PMC Article
  3. Glycosyltransferases, glycoside hydrolases: surprise, surprise! Henrissat B, et al. Curr Opin Struct Biol, 2008 Oct. PMID 18822375
  4. Time-dependent proteome alterations under osmotic stress during aerobic and anaerobic growth in Escherichia coli. Weber A, et al. J Bacteriol, 2006 Oct. PMID 17015655, Free PMC Article
  5. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on complete protein
    Title: Characterization of a cytoplasmic trehalase of Escherichia coli.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables alpha,alpha-trehalase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables alpha,alpha-trehalase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables alpha,alpha-trehalase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cellular hyperosmotic response IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cellular hyperosmotic response IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in trehalose catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in trehalose catabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within trehalose catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in trehalose metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cytoplasmic trehalase
NP_417976.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3669592..3671241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417976.1 cytoplasmic trehalase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417976.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A793GCL3
    Conserved Domains (1) summary
    PRK13270
    Location:1 → 549
    treF; alpha,alpha-trehalase TreF
Nucleotide Protein
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