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hemX PF04375 family protein HemX [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948446, updated on 4-Apr-2024

Summary

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Gene symbol
hemX
Gene description
PF04375 family protein HemX
Primary source
ASAP:ABE-0012419
Locus tag
b3803
See related
ECOCYC:EG10433
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3797
Summary
The HemX protein was suggested to be a uroporphyrinogen III methylase . [More information is available at EcoCyc: EG10433].
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Genomic context

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Sequence:
NC_000913.3 (3987885..3989066, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein HemY Neighboring gene uroporphyrinogen-III synthase Neighboring gene hydroxymethylbilane synthase Neighboring gene adenylate cyclase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes. Daniels DL, et al. Science, 1992 Aug 7. PMID 1379743
  2. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  3. ZapG (YhcB/DUF1043), a novel cell division protein in gamma-proteobacteria linking the Z-ring to septal peptidoglycan synthesis. Mehla J, et al. J Biol Chem, 2021 Jan-Jun. PMID 33895137, Free PMC Article
  4. Nucleotide sequence of the hemX gene, the third member of the Uro operon of Escherichia coli K12. Sasarman A, et al. Nucleic Acids Res, 1988 Dec 23. PMID 3062586, Free PMC Article
  5. The sequence of hemC, hemD and two additional E. coli genes. Alefounder PR, et al. Nucleic Acids Res, 1988 Oct 25. PMID 3054815, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on complete protein
    Title: Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
PF04375 family protein HemX

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3987885..3989066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418247.1 PF04375 family protein HemX [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418247.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6D0ICI6
    Conserved Domains (1) summary
    PRK10920
    Location:1 → 393
    PRK10920; putative uroporphyrinogen III C-methyltransferase; Provisional
Nucleotide Protein
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