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alsK D-allose kinase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948596, updated on 2-May-2024

Summary

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Gene symbol
alsK
Gene description
D-allose kinase
Primary source
ASAP:ABE-0013380
Locus tag
b4084
See related
ECOCYC:EG11956
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4077; yjcT
Summary
Upregulated by GSNO in defined medium (aerobic). [More information is available at EcoGene: EG11956]. The alsK gene encodes a D-allose kinase. [More information is available at EcoCyc: EG11956].
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Genomic context

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Sequence:
NC_000913.3 (4306870..4307799, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative lipoprotein YtcA Neighboring gene linear primary-alkylsulfatase Neighboring gene D-allulose-6-phosphate 3-epimerase Neighboring gene D-allose ABC transporter membrane subunit Neighboring gene D-allose ABC transporter ATP binding subunit Neighboring gene D-allose ABC transporter periplasmic binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reconstitution of a defunct glycolytic pathway via recruitment of ambiguous sugar kinases. Miller BG, et al. Biochemistry, 2005 Aug 16. PMID 16086580
  2. D-Allose catabolism of Escherichia coli: involvement of alsI and regulation of als regulon expression by allose and ribose. Poulsen TS, et al. J Bacteriol, 1999 Nov. PMID 10559180, Free PMC Article
  3. Transcriptional responses of Escherichia coli to S-nitrosoglutathione under defined chemostat conditions reveal major changes in methionine biosynthesis. Flatley J, et al. J Biol Chem, 2005 Mar 18. PMID 15647275
  4. Divergent evolution of function in the ROK sugar kinase superfamily: role of enzyme loops in substrate specificity. Larion M, et al. Biochemistry, 2007 Nov 27. PMID 17979299
  5. The D-allose operon of Escherichia coli K-12. Kim C, et al. J Bacteriol, 1997 Dec. PMID 9401019, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables D-allose kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables D-allose kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables carbohydrate kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables glucokinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables hexokinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within D-allose catabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in D-allose catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
  
involved_in glucose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
D-allose kinase
NP_418508.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4306870..4307799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418508.1 D-allose kinase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418508.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3W5Y2G4
    Conserved Domains (1) summary
    PRK09698
    Location:3 → 304
    PRK09698; D-allose kinase; Provisional
Nucleotide Protein
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